AP3+PI MIK aa align.nex

#NEXUS 
[MacClade 4.06 registered to David Baum, Harvard University Herbaria]


BEGIN DATA;
	DIMENSIONS  NTAX=85 NCHAR=171;
	FORMAT DATATYPE=PROTEIN  SYMBOLS = " 1 2 3 4"  MISSING=X GAP=-  INTERLEAVE ;
MATRIX

[                     10        20        30        40        50]
[                     .         .         .         .         .]

MdAP31       -------------------------GGIVKKARELTVLCDAEVSLIMFST   [25]
MdAP32       -------------------------GGIVKKARELTVLCDAEVSLIMFSS   [25]
MdAP33       -------------------------GGIVKKARELSVLCDAEVSLIMFSS   [25]
DeAP3        -------------------------AGIMKKARELTVLCDAEVSLIMFSS   [25]
ScAP3        -------------------------AGIMKKARELTVLCDAEVSLIMFSS   [25]
CsAP3        -------------------------GGILKKAKELSVLCDAQVSLIMSSS   [25]
PhAP3        ----------IENDTNRQVTFSKRRNGLFKKAQELTVLCDAQISIILISS   [40]
HtcAP32      ----------IENDTNRQVTFSKRKNGLFKKADELTVLCDAQISIIMFSS   [40]
ThsAP3       -------------------------SGIFKKARELTVLCDAEVSLIMFSS   [25]
SrhAP3       -------------------------GGIFKKARELTILCDAEVSLIMFSS   [25]
AeAP31       -------------------------GGIFKKAQELTVLCDAQVSLIMFSS   [25]
AreAP3       -------------------------GGIFKKARELTVLCDAEVSLLMFSS   [25]
AmtAP3       -------------------------AGITKKAKELTVLCDAEVCLIMFSG   [25]
LtAP3        -------------------------GGIMKKAKELTVLCDAEVSLIMFSS   [25]
MpMADS7      MGRGKIEIKRIENSTNRQVTYSKRRGGIMKKAKELTVLCDAQVSLIMFSS   [50]
MfAP3        -------------------------GGIMKKAKELTVLCDAQVSLIMFSS   [25]
DrwAP32      -------------------------GGIFKKARELTVLCDAEVSLIMFST   [25]
DrwAP33      -------------------------VGIFKKARELTVLCDAEVSLIMYSS   [25]
DrwAP34      -------------------------GGIFKKARELTVLCDAEVSLIMFSS   [25]
DrwAP31      -------------------------GGIFKKARELTVLCDAEVSLIMFSS   [25]
CfAP31       -------------------------GGILKKAREITVLCDAEVSLIMFSS   [25]
CfAP32       -------------------------GGILKKARELTVLCDAEVSLIMFSS   [25]
LneAP31      -------------------------GGILKKARELTVLCDAEVSLIMFSS   [25]
LneAP32      -------------------------GGILKKARELTVLCDAEVSLIMFSS   [25]
SmAP3        MGRGKIEIKKIENSTNRQVTYSKRRAGLIKKAEELTVLCDAQINLILISG   [50]
HhMADS1      MGRGKIEIKKIENSTNRQVTYSKRRSGIMKKAKELTVLCDADVSIIMFSS   [50]
TcAP3        -------------------------QGIMKKAKELTVLCDAEVSIIMFSS   [25]
IhAP31       -------------------------GGILKKARELTVLCDAQVSLIMFSS   [25]
IhAP32       -------------------------VGILKKAWELSVLCDAHVSLIMISN   [25]
IhAP33       -------------------------VGILKKARELSVLCDAEVSLIMFSN   [25]
NymAP3       -------------------------AGIIKKAKELTVLCDAHVSLILFSS   [25]
NymPI        -------------------------QGILKKAREISVLCDAQVSLILFSS   [25]
MdPI         -------------------------NGILKKAREITVLCDAQVSLVIFSS   [25]
DePI         -------------------------NGIMKKAKEITVLCDAEVSLVIFSS   [25]
ScPI         -------------------------NGILKKAKEITVLCDAKVSLVIFSS   [25]
AmtPI        -------------------------GGIMKKAKEISVLCEAEVSLIIFSS   [25]
TtsPI        -------------------------GGIMKKAREISVLCDAQVSLIVFSS   [25]
TtsPI2       -------------------------TGILKKAKEITVLCDAEISLVVFSS   [25]
ArePI        -------------------------GGIMKKAREISVLCDAQVSLVIFSS   [25]
SrhPI        -------------------------GGILKKAKEISVLCDSHVSLVVFSS   [25]
AspPI        -------------------------GGILKKAREISILCGAQVALIVVSS   [25]
AePI         -------------------------GGILKKAREISILCGAQVSLIIVSS   [25]
LnePI1       -------------------------GGILKKAKEITVLCDAQVSLVVFSS   [25]
LnePI2       -------------------------NGLLKKAKEITVLCDSDVSLVIFSA   [25]
IhPI2        -------------------------GGIIKKAKEIAVLCDAEVSLIIFSS   [25]
IhPI1        -------------------------GGIIKKAKEISVLCDAQVSLVIFSS   [25]
DrwPI2       -------------------------GGIVKKAKEITVLCDAQVSLVIFSS   [25]
DrwPI1       -------------------------GGIVKKAKEISVLCDAQVSLVIFSS   [25]
MfPI         -------------------------GGILKKAKEITVLCDAQVSLVIFSS   [25]
LtPI         -------------------------GGILKKAKEITVLCDAQVSLVIFSS   [25]
MpMADS8      ---------------------------------ELSVLCDAQVSLVIFSS   [17]
CfPI1        -------------------------GGILKKAKEITVLCDAQVSLVIFSS   [25]
CfPI2        -------------------------SGLLKKAKEITVLCDADVSLIIFSA   [25]
CsPI         ----------IENSTNRQVTFSKRRNGIVKKAKEITVLCDAKVSFIIFST   [40]
PmPI1        ----------IENMTNRQVTYSKRKKGIIKKAQEISVLCDTQVSLVIFSS   [40]
PhPI         -------------------------KGIIKKAQEISVLCDTHVSVLIFSS   [25]
PmPI2        ----------IENVSNRQVTFNKRKAGLLKKAREISVLCDAEVALVIVSS   [40]
TcPI         -------------------------NGIIKKAREISVLCDAQVSVVIFSS   [25]
HtcPI1       ----------IENVNNRQVTYSKRKRGIIKKALEIIVLCDAHVSLVIFST   [40]
HtcPI2       ----------IENVNNRQVTYSKRKRGIIKKAQEISVLCDAHVSLVIFST   [40]
SmPI         MGRGKIEIKRIENSANRQVTYSKRRNGIIKKAREISVLCGCEVSLVIFSS   [50]
HPI1         MGRGKIEIKRIENSTNRQVTFSKRRNGIIKKAKEISVLCESEIAIVVFSS   [50]
PrDGL        MGRGKIEIKMIENATNRQVTFSKRRGGLKKKAQELSVLCNAEVALIIFSS   [50]
GGM2         MGRGKIEMKKIENTNNRQVTFSKRRNGLMKKAQELAVLCDAEVGLIIFSS   [50]
GGM15        MGRGKLEIKRIENLTNRQTTFAKRKNGLMKKAKELSILCDAQVALIVFSP   [50]
DAL13        MGRGKIEIKMIENPTNRQVTFSKRRGGLTKKAQELSVLCNAEVALIVFSN   [50]
DAL12        MGRGKIEIKKIENLTNRQVTFSKRKAGLQKKAKELSILCSAEVALIIFSS   [50]
DAL11        MGRGKIEIKMIENESNRKVTFSKRRGGLFKKARELSVLCEAEVALIVFSS   [50]
CjMADS1      MGRGKIEIKRIESTTNRQVTFSKRRSGLFKKAKEISILCASDVAVIVFNS   [50]
ABS          MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSA   [50]
DEFH21       MGRGKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFST   [50]
FBP24        MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSS   [50]
AqaBS1       -------------------------GGLIKKARELSVLCDAQLGLIIFSS   [25]
DrwBS        -------------------------GGLFKKAHELAVLCDVQVGLVIFST   [25]
AeAP32       -------------------------GGLLKKARELAILCDAQLGVIIFSS   [25]
ZMM17        MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSS   [50]
GGM13        MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSS   [50]
ANR1         MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSS   [50]
DEFH125      MGRGKIVIQRIDKSTSRQVTFSKRRSGLLKKAKELAILCDAEVGVVIFSS   [50]
MSU91964     --RGKIQIKRIENTTNRQVIFSKRRNGLLKKAKELAILCDAEVGVMIFSS   [48]
F20D10.60    MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSS   [50]
AGL17        -------IQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSN   [43]
F28O9.80     MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSS   [50]
BnAGL15      MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSK   [50]
AGL15        MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSK   [50]

[                     60        70        80        90        100]
[                     .         .         .         .         .]

MdAP31       TGKLSEYISPST------TTKKIFDRYQHISG-TNL--WNSHYKQMQDN-   [65]
MdAP32       TGKFSEYISPST------STKKIFDRYQQTSG-IIL--WNSHYESMQDN-   [65]
MdAP33       TGKLSEYISPST------TTKKIFDRYQHISG-INL--WNSHYERMQDH-   [65]
DeAP3        TGKFSEYISPSA------TTKRMFDRYQQVSG-VNL--WNSHYERMQDN-   [65]
ScAP3        TGKFSEYISPSA------TTKRIYDRYQQVSG-TNL--WNSHYESMQNH-   [65]
CsAP3        TGKFYEYCSPGT------NTKKIFDRYQQASG-INL--WNSQYEKMQEY-   [65]
PhAP3        TNRLYDYCSPST------SHKKVYDQYQDGRK-VDL--WKKRYENMKHQ-   [80]
HtcAP32      TDKLHEYCSPST------THKHIYDRYQKSGK-EDL--WRSHYEKMKNQ-   [80]
ThsAP3       TGKLSEYCSPST------TTKKMYDKYQEVSQ-INL--WSSHYEKMQAH-   [65]
SrhAP3       TGKFSEYCSPST------TTKKIFDRYQQVSG-INL--WSSHYEKMQNH-   [65]
AeAP31       TGKYSEYCSPST------TTKQIYDKYQEASG-INL--WSSHYEKMQNL-   [65]
AreAP3       TGKLSEYCSPST------TTKKVYDRYQEVTG-INL--WSSHYEKMQNH-   [65]
AmtAP3       TGKFSEYCSPST------TTKKTFDRYQQVSG-INL--WESHYEKMQTH-   [65]
LtAP3        TGKFSEYCSPST------TTKKIFDRYQQVSG-SSL--WNSHYEKMQSH-   [65]
MpMADS7      TGKFSEYCSPST------TTKNIFDRYQQASG-ISL--WNSHYERMQSH-   [90]
MfAP3        TGKFSEYCSPST------TTKNIFDRYQQASG-TSL--WNSHYERMQGH-   [65]
DrwAP32      TGKFFEYCSPST------TTKKIFDRYQQVSG-INL--WNTQYEKMQGH-   [65]
DrwAP33      TGKFCEFCSPST------TTKKIFDRYQQVSG-INL--WNTQYEKMQGN-   [65]
DrwAP34      TGKFCEYCSPST------TTKKIFDRYQQVSG-TNL--WNTQYEKMQSI-   [65]
DrwAP31      TGKFCEYCSPST------TTKKIFDRYQQVSG-TNL--WNTQYEKMQSN-   [65]
CfAP31       TGKFSEYCSPPT------TTKKIFDRYQHVSG-INL--WNSHYEKMQNH-   [65]
CfAP32       TGKFSEYCSPSS------TAKKIFDRYQQVSG-INL--WNSHYEKMQNH-   [65]
LneAP31      TGKFSEYCSPTT------TTKKVFDRYQQVSG-INL--WNSHYEKMQNH-   [65]
LneAP32      TGKFSEYCSPTT------TTKKVFDRYQQVSG-INL--WNSHYEKMQNH-   [65]
SmAP3        SRKVHHYCSPST------DIHTVMDRYQQLTD-SDL--WQPQYEGMQKT-   [90]
HhMADS1      TGKFSEYCSPGT------DTKTVFERYQQATQ-TNL--WSTQYEKMQNT-   [90]
TcAP3        TGKFAEYCSPST------DTKKVYDRYQQVTG-IDL--WSSQYERMQNN-   [65]
IhAP31       TGKFSEYCSPSA------TTKKIFDRYQHVSG-INL--WNSHYQKMQVE-   [65]
IhAP32       SGKLSEYCTPTT------TTKSMLDRYQEVSG-INL--WSSNYEKLQTQ-   [65]
IhAP33       SGKLSEYCTPST------SIKSILDRYQHISG-INL--WSSHYQKMKSH-   [65]
NymAP3       THKLFEYCSPTT------TMKKMIDRYQQVTG-TNL--WDSHYESMQKE-   [65]
NymPI        AGKLNEYCSPST------SLKELLTRYQKTSG-KKL--WDARHEYLNTE-   [65]
MdPI         TGKMSEYCSPST------TLIKTLDRYQRTSG-KKL--WDAKHEYLSTE-   [65]
DePI         TGKMSEYCSPST------TLIKILDRYQKASG-KRL--WDAKHEYLSSE-   [65]
ScPI         TGKMAEYCSP-------CPLIEILDRYQKSSG-KRL--WDAKHEYLSAE-   [64]
AmtPI        SGKMSEFCSPST------TLPKILDRYQKSSG-KKL--WDAKHEHLSNE-   [65]
TtsPI        TGKMSEFCSPST------TLVKLLDRYHKQSS-KKL--WDAKHEFLSNE-   [65]
TtsPI2       TGKMSEYCSPST------TLIGMLDRYQKSSG-KKL--WDAPHEFLSME-   [65]
ArePI        TGKMSEFCSPST------TLVKLLDRYHKQAG-KKL--WDAKHEYLSNE-   [65]
SrhPI        TGKMSEYCSPST------TLVKVLDRYQKTSG-KKL--WDAKHEYLSNE-   [65]
AspPI        TGKVYDFCSPST------PLVEILDRYHGSSE-NRL--WDPKHEYLSNE-   [65]
AePI         TGKVYDFCSAST------PLADILDKYHSSSE-NKL--WDPKHEYLSNE-   [65]
LnePI1       TGKMSEYSSPST------TLVKILDRYQKASG-KKL--WDAKHEFLSNE-   [65]
LnePI2       TGKMSEYCSSST------TLIKMLDRYQKASG-NRL--WDAKHEYLSME-   [65]
IhPI2        SGRMSDYCSPST------NLIKLLDRYQNTSG-KRL--WDAPHEYLKNE-   [65]
IhPI1        TGKMSEYCSPST------NLMKLLDRYQNTSG-KRL--WDARHEYLKNE-   [65]
DrwPI2       TGKMSDYCSPST------TLVKLLDRYQNSSG-NKL--WDAKHEYLSNE-   [65]
DrwPI1       SGKMSEFCSSST------TLVKLLDRYQKTSG-KKL--WDAKHEYLSNE-   [65]
MfPI         TGKMSEYCSPST------ELVNVLDRYHKSAG-KKL--WDAKHEHLSNE-   [65]
LtPI         TGKISEYCSPST------TLVKILDRYQKSSG-KKL--WDAKHEHLSNE-   [65]
MpMADS8      TGKMSEYCSPST------ELVKILDRYHKNAGVQKL--WDAKHEHLSNE-   [58]
CfPI1        TGKMSEYCSPST------TLVKILDRYQKASG-KRL--WDAKHEYLNNE-   [65]
CfPI2        TGKMSEYCSPST------SLIKILDRYQKASG-NKL--WDAKHEYLSME-   [65]
CsPI         TGKMFEFVSPST------TLMDMLERYQTNSG-KRL--WDAKHERLSAE-   [80]
PmPI1        AGNMGEFCSPKT------TMDAILTRYQNSKG-SQL--WNAKHEYLKQE-   [80]
PhPI         AGNMGEFCSPKT------TMDAILTRYQNSTG-TQL--WNAKHESLKQE-   [65]
PmPI2        SAKVEEFCSPQN------KLEDVLKKYQDLSG-NKL--WDAKHECLSQE-   [80]
TcPI         SGKMSEYCSPST------SLSKMLEKYQQNSG-KKL--WDAKHENLSAE-   [65]
HtcPI1       AGKMDVFCSPRA------TVDQILSRYQQNTG-NQL--WDAKHEYLKQE-   [80]
HtcPI2       SGNMGVFCSPQT------KVDQILSRYQQNTG-NQL--WDAKHEYLKQE-   [80]
SmPI         SGKMSEFHS--T------TLSKILETFQQNQG-QTL--WGAKHESLKAE-   [88]
HPI1         LSKMSEFCSPNT------TFPKMLEKYQQHSG-KKL--WDAKHENLSAE-   [90]
PrDGL        TGKLHEWSSSSSFFMLQKSMKKILERYQKSEQGLGL--MDYQHQQLLCE-   [97]
GGM2         TGKLFQYC--NT------SMSQVLEKYHKSPGVDHW--DIELQIMG-QE-   [88]
GGM15        TGKQFIEAHGNNAECTIESVRDVIERYKQQSKEKLL--DSEDENLA-NE-   [96]
DAL13        TGKLHQWSS--S------SMKKVLERYQKSEQGLGL--MDYQHQQLLFE-   [89]
DAL12        SGKHYEYSSPCS------SVEQIVEKYMNVSGSKLG--EDQINTLIDGC-   [91]
DAL11        TGNHQEFAS--S------SMKNILERYKASTGIGLL--DYQDQMLSD-M-   [88]
CjMADS1      TGRLFDFAS--S------SMKRILERYRNASGRGVWNNEYEQMLSQFRN-   [91]
ABS          TGKLSEFCSEQN------RMPQLIDRYLHTNGLRLP--DHHDQEQLHHE-   [91]
DEFH21       KGKLTEYCTPPF------SMKQIIDRYVKAKGI-LP--EMENRAGPHADN   [91]
FBP24        KGKLFEYCSQPH------SMSQIISRYLQTTGASLP--VEDNRVQLYDE-   [91]
AqaBS1       SGKLFEFTSEDN------SMQEILARYQKATGKSIK--EYDNQAQEVRE-   [66]
DrwBS        SGKMFEYCNPQS------SMRQLFDRYQKVSGNRIQ--EYDN-QQIYCE-   [65]
AeAP32       SGKMFEFSSPPI------SMREIIDRYQKLSGNCAP--VYDN-QQVYCE-   [65]
ZMM17        TGKMFEYCSPAC------SLRELIEQYQHATNSH----FEENHDQILLE-   [89]
GGM13        SGKLFEYSSASS------SMKKIIERYQKVSGARIT--EYDNQH-LYCE-   [90]
ANR1         TGKLYDYAS-NS------SMKTIIERYNRVKEEQHQ---LLNHASEIKFW   [90]
DEFH125      TGKLYEFSS--T------SMKSIIERHTKTKEDHHQ---LLNHGSEVKFW   [89]
MSU91964     TAKLYDFAS--T------SLRSVIGRYNKSKEEHNQ---LGSTASEIKFG   [87]
F20D10.60    TGKLYDFAS--S------SMKSVIDRYNKSKIEQQQ---LLNPASEVKFW   [89]
AGL17        TDKLYDFAS--S------SVKSTIERFNTAKMEEQE---LMNPASEVKFW   [82]
F28O9.80     TGRLYDFSS--S------SMKSVIERYSDAKGETSS--END-PASEIQEM   [89]
BnAGL15      SGKLFEFSS--T------SMKKTLLRYGNYQISSDVP--GINCKTENQEE   [90]
AGL15        SGKLFEYSS--T------GMKQTLSRYGNHQSSS---------ASKAEED   [83]

[                     110       120       130       140       150]
[                     .         .         .         .         .]

MdAP31       ------LNKLKEINNSLRREIRQRIGEDLSGLSIEELRGLEQNLDKAEKI   [109]
MdAP32       ------LNKQKEINNKLRREIRQRIGEDLNDLSIEELRGLEQNLDNSVKL   [109]
MdAP33       ------LNKQKEINSKLRREIRQRIGEDLTDLTIEELRGLEQNLEKSWNV   [109]
DeAP3        ------LNKQKEINNKLRREIRQRMGEDLNDLSIEELRGLEQNMDNSLKI   [109]
ScAP3        ------LNKQKEINNRLRREIRQRMGEDLDDLTFEELRGLEQNLDTSLKV   [109]
CsAP3        ------FEKLKETNNKLRKEIRQRRGEDLNGLNINELRSLEQNLDDSLKI   [109]
PhAP3        ------LNEQSERSNKLKKEIRQFMGEELDGLSFEQLHGLEQKVERASNI   [124]
HtcAP32      ------LHMHMEENERLRKEIRQYMGEDLSGLSFNELRGLEQNMERVSNI   [124]
ThsAP3       ------LNKLKEDNSNLRKEIRQRMGENLNGLHMEELRGLEQNMDLALKV   [109]
SrhAP3       ------LNKLKDDNNKLRREIRQRIGEDLSDLEIEELRGLEQNLESSLKV   [109]
AeAP31       ------LNKLNDDNNKLRKEIRQRIGEDLSGLEIEELRGLEQNLESSLKV   [109]
AreAP3       ------LNKLKDENSGLRRAIRQRMGEDLDGLEMEELRGLEQNMDNALKV   [109]
AmtAP3       ------LIKLKEDNSRLRREIRQRIGEDLDDLELEQLRGLEQNIESSVKA   [109]
LtAP3        ------LNKLKEDNNSLRRAIRHRIGEDLDDLEIEELRGLEQNLESSIKV   [109]
MpMADS7      ------LIKLKEENNNLRREIRQRIGEDLEDLEIEELRGLEQNLESSIKV   [134]
MfAP3        ------LIKLKEENNNLRREIRQRIGEDLDDLEIEELRGLEQNLESSIKV   [109]
DrwAP32      ------LSKLKEVNNKLRKEIRQRMGEDLNDLEIEEMRGLEQNLESSLKV   [109]
DrwAP33      ------LDKLKENNNKLRKEIRQRMGEELNDLEIKELRCLEQNLESSLKA   [109]
DrwAP34      ------LKKVKEDNNKLRKEIRQRMGEDLDDLKIEELRGLEQKLESSVKV   [109]
DrwAP31      ------LKKVKEDNNKLRKEIRQRMGEDLNDLEIEEMRGLEQNLESSLKV   [109]
CfAP31       ------LSKLTEDNNRLRREIRQRMGEDLNELEIDELRGLEQNLNDSLKV   [109]
CfAP32       ------LNKLKEDNNNLRREIRQRMGEDLNDLEIDELRGLEQNLDNSLKV   [109]
LneAP31      ------LNKLKDDNNNLRREIRQRMGEDLNDLDIDELRGLEQNLDNSVKI   [109]
LneAP32      ------LNKLKNDNNNLRREIRQRMGEDLNDLDIDELRGLEQNLDNSLKI   [109]
SmAP3        ------LNHLKETNNNLRKQIRQRMGEDLEDLNMNELLALEREMDESITV   [134]
HhMADS1      ------LNHLKEINHNLRKEIRQRIGEELDGMDFKELRGLEQNLDEALKS   [134]
TcAP3        ------LNHLEEINRNLRREIRQRTGEDLDGLDIKELRGLEQNVDEALRI   [109]
IhAP31       ------LNKLKEENNKLRRKIRQRVGGDLDGLNEKELRGLEQNLVDCAKI   [109]
IhAP32       ------LNKLKEENESLRKDISHKKGEDLIDLSFEELRGLEHSIEQHLKL   [109]
IhAP33       ------LNKLQEENERLRKEISHTKGEDLVGLSFNELRGLEHSIDEYLKV   [109]
NymAP3       ------FNKLKEKNERLRKSIRQRIGEDLDELNHSELCGLEQNLSEALKK   [109]
NymPI        ------LDRIRKENENMQIELRHLMGEDLSSLSVVELRNLEDSLQFGYDH   [109]
MdPI         ------VDRIKKENDSMQIELRHLNGEDLTSLQPKELIPIEDALKNGLDS   [109]
DePI         ------VDRVKKENDNMQIELRHLKGEDLTSLHPKELISIEDALQNGLVG   [109]
ScPI         ------VDRIKKENDNMQIELRHLKGEDLTSLHPKELIPIEKALEVGYAS   [108]
AmtPI        ------LERIKKENDSMQIKLRHLKGQDLNSLNPRELIPIEDALENGLAN   [109]
TtsPI        ------IDRIKKENDSMQIRLRHLRGEDVNSLPLKELIAIEAALEEGVGS   [109]
TtsPI2       ------VERMKRENDKLQIDLRHLKGEDISSLQPKELIPIEDALENGLTC   [109]
ArePI        ------VERVKKENDNMQIKLRHLKGEDINSLPLKELMAIEEALEEGVSG   [109]
SrhPI        ------VERIKKENDSMQIKLRHLKGEDITSLNPKELIAIEEGLQDGLAG   [109]
AspPI        ------VKRIKKENDSMRIKLGHLKGEDVNSLHLNELIPIEEALQDGLDG   [109]
AePI         ------VKRIKKENDSMQIKLGHLKGEDVNSLHLNELIPIEEALQDGLDG   [109]
LnePI1       ------VERIKKENDSMQIKLRHLKGEDLTSLHPKELIPIEEALENGLAN   [109]
LnePI2       ------IDRIKKENDTMQIELRHSKGEDLTSLHPKELIHIEEALENGLTG   [109]
IhPI2        ------VDRIKKENETMTTELRHLEGEDLSSLTTQELSVIEDSLQNGVAN   [109]
IhPI1        ------VDRVRKENESMQIELKHLEGEDLSSLTTHELSAIEESLQNGIAN   [109]
DrwPI2       ------VERIKKENDSMQIKLRHLKGEDITSLHPKELISIEEALQNGVTA   [109]
DrwPI1       ------VDRIKKENDSMQIKLRHLKGEDLTSLHPKELMSIEDALQNGLTG   [109]
MfPI         ------LERIKKENDSMHVKLRHLKGEDITSLHPKELIPIEEALENGLAC   [109]
LtPI         ------VERIKKENDSMQIKLRHLKGEDITSLHPRELLPIEEAFQNGLAC   [109]
MpMADS8      ------LERIKKENDSMHIKLRHLKGEDINSLHPKELIPIEEALENGLAC   [102]
CfPI1        ------VERIKKENDSMQIKLRHLKGEDLTSLHPKELIPIEEALENGLAS   [109]
CfPI2        ------VERIKKENDSMQIELRHLKGEDLTSLRPKELIPIEEALQNGLTN   [109]
CsPI         ------LDRIKKENDSMQIELRHLKGEDINSLHPKELIPIEEALQSGLTN   [124]
PmPI1        ------KERIEKENGRLQLRLRQLKGEDITSLKPEELIEIENILEDGLTN   [124]
PhPI         ------KERIEKENGRLQLRLRQLKGEDITSLKPEELIEIESILDDGLTN   [109]
PmPI2        ------IDRIRKENDAMSIRLRHLEGIDVSSLNHQELEVLEKTLENGLAS   [124]
TcPI         ------IDRMKKENDNMQIELRHLKGEDLNQLNAKELIPIEDALHNGLTN   [109]
HtcPI1       ------VERIKKENDRLRIKLRQLKGEDIASLNHLELDEIERTLEDGLAN   [124]
HtcPI2       ------VERIKKENDRLRIKLRHLKGEDITSLHHQELTEIEYTLEDGLAN   [124]
SmPI         ------IDRMKKENDNMRIQLRHMKGEDLTSMEPRDLYTIETALINGIAN   [132]
HPI1         ------IDRIKRENDNMQIELRHLKGEDLSSLNPRELIPIEEALQNGVTG   [134]
PrDGL        ------MRRITKENESLQERLRHMNGEEVNSLKLPELFKLEEQLDKAATQ   [141]
GGM2         ------LIKERRENEKLRSKLRYMMGEDIGELKIAQLEKLEHDLESALRL   [132]
GGM15        ------LEKQKKQSADLQTKLKHLTGQDINLLSPDALGDLEHILQEALTR   [140]
DAL13        ------MRRITKENESLQARLRHMRGEDINSLKLPELFNLEEQLELAGTQ   [133]
DAL12        ------VVKGDIEIVGLRRVIRHLTGGDLESLSVNELQKLEDQLEIVTSR   [135]
DAL11        ------A-RIKRENEILHADLRYMMGEDLDSSDIKDMMSLEDHLDKVSGL   [131]
CjMADS1      ---------LKKENEELQKELSCVTGENVETLAPKQLDYLEENLVLAAKK   [132]
ABS          ------MELLRRETCNLELRLRPFHGHDLASIPPNELDGLERQLEHSVLK   [135]
DEFH21       DQVIKELTRMKEETLNLQLNLQRYKGDDLSTVRFEELTELEKLLDQSLNK   [141]
FBP24        ------VAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNK   [135]
AqaBS1       ------MLRLRDQTDRLQASIRQYTGGNLTALDYNDLNELEQQLEVSVDK   [110]
DrwBS        ------MTKLKHEYDKLHTSMRHFTGDDLSTLSLNDLHQIEEQLEISVNK   [109]
AeAP32       ------ITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNK   [109]
ZMM17        ------MTRMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSK   [133]
GGM13        ------MTRMKNENEKLQTNIRRMMGEDLTSLTMTELHHLGQQLESASSR   [134]
ANR1         QRE---VASLQQQLQHLQECHRKLVGEELSGMNANDLQNLEDQLVTSLKG   [137]
DEFH125      QRE---AATLRQQLQDLQENHRKLMGEELQGLNVEDLHRLENQLEMSLRG   [136]
MSU91964     QRE---AAVLRQQLHNLQESHRQIMGEELSGLTVKELQGLENQLEISLRG   [134]
F20D10.60    QRE---AAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRG   [136]
AGL17        QRE---AETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRG   [129]
F28O9.80     Y----IVTLEKYAYSEELVLDRQMMGEELSGLSVEALQNLENQLELSLRG   [135]
BnAGL15      CTE---VDLLKDEISMLQEKHLHMQGKPLNLLSLKELQHLEKQLNFSLIS   [137]
AGL15        CAE---VDILKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALIT   [130]

[                     160       170]
[                     .         . ]

MdAP31       VRERKYHVIATQSDTYKKKIR   [130]
MdAP32       VRERKYHVVTTQSDTYKKKIR   [130]
MdAP33       VRERKYHVLATQTDTYKKKVR   [130]
DeAP3        VRDRKYHVITTQTETYRKKLR   [130]
ScAP3        VRDRKYHVITTQTDTTRKKIR   [130]
CsAP3        IRERKYHVIKTQTETYGKKLK   [130]
PhAP3        VRERKEKAISTKVDTLNKKVK   [145]
HtcAP32      VRNKKNHVITTRAETSRKKVR   [145]
ThsAP3       VRERKYHVIQTQCDTYKKKIR   [130]
SrhAP3       VRDRKYHVINTQTETYKKKIK   [130]
AeAP31       VRDKKYQVISSQTETKKKKVK   [130]
AreAP3       VRERKYHVIHTQCDTYRKKIR   [130]
AmtAP3       VRERKYHVISTQTETYKKKIR   [130]
LtAP3        VRERKYHVINTQTETYKKKLR   [130]
MpMADS7      VRDRKYHVITTQTETYKKKLR   [155]
MfAP3        VRERKYHVIQTQTETYKKKLR   [130]
DrwAP32      VRERKYHVINTQTDTYKKKLR   [130]
DrwAP33      VRERKYHVIITQTETYKKKLR   [130]
DrwAP34      VRERKYHVINTQTETYKKKLR   [130]
DrwAP31      VRERKYHVINTQTETYKKKLK   [130]
CfAP31       VRERKYHVINTQTETYKKKLR   [130]
CfAP32       VRERKYHVINTQTETYKKKLR   [130]
LneAP31      VRERKYHVINTQTDTYKKKLK   [130]
LneAP32      VRERKYHVISTRTETYKKKLR   [130]
SmAP3        VRDKKYHVLTTRTDTAKKKWK   [155]
HhMADS1      VRARKYHVITTQTDTYKKKVK   [155]
TcAP3        VRQRKYHVITTQTDTYKKKLK   [130]
IhAP31       VRDRKYHVINNESETFRKKIR   [130]
IhAP32       VQEKKLRKIATQIETYKKKVR   [130]
IhAP33       VSEKKIRKIVTQIDTCKKKVR   [130]
NymAP3       IRLTLENKIKRQIDTCRKKIR   [130]
NymPI        VRVKQTECLNNDIEILRKNER   [130]
MdPI         VRAKLMEDFK----TLKKNER   [126]
DePI         VRAKQMEFMK----MMKKNER   [126]
ScPI         VRAKQMEIWK----TLKKNGR   [125]
AmtPI        VREKQMDYVK----MKKKNTR   [126]
TtsPI        VRAWQMEALK----MHKRNER   [126]
TtsPI2       IRHKQMELLN----SCKKNER   [126]
ArePI        VRSRQMEALK----MHKKNGR   [126]
SrhPI        VRAKQVEFLK----ILKKNER   [126]
AspPI        VRAKQAELLK----ILKKNGR   [126]
AePI         VRAKQAELLK----TLKKNGR   [126]
LnePI1       VRASQMEFLR----ALKKNER   [126]
LnePI2       VRDKQEELLS----ILKKNER   [126]
IhPI2        VRTRQMEFLK----MLKKNER   [126]
IhPI1        VRMTQMELLN----MLKKSER   [126]
DrwPI2       VRAKQMEFLK----MLKKNER   [126]
DrwPI1       VRAKQMEFLK----MLKKNER   [126]
MfPI         VRSRQMQCLK----MLKKNER   [126]
LtPI         VRSKQMEYLK----MLKKNER   [126]
MpMADS8      VRSEQMQCLK----TLKKNER   [119]
CfPI1        VRDRQMECLR----IYKKNER   [126]
CfPI2        VRERQEELLK----ILKKNEK   [126]
CsPI         VRAKQMDFLK----MLKKNER   [141]
PmPI1        IRNKSDGLLE----GSNQEYK   [141]
PhPI         IRNKQD--------------K   [116]
PmPI2        IRRQEMEIRD----ARENNIK   [141]
TcPI         VREKQMDFLK----MLKKNER   [126]
HtcPI1       IRKKQMDCWK----IHKKQIR   [141]
HtcPI2       IRKKQMDCWN----IHEKRIR   [141]
SmPI         VRGKQMEIFK----KKAKNQK   [149]
HPI1         ARAKQMEFLK----MMKLNGK   [151]
PrDGL        VRRRKDHVLENERIKQRNKMR   [162]
GGM2         VRRKKDHAWDYQRTILLKKVK   [153]
GGM15        VRQKKIQRWLSKKIEMERRVA   [161]
DAL13        VRRRKDHVLDNEKTKRQNKER   [154]
DAL12        VRKKRFQRMQEQLEAMTQELE   [156]
DAL11        VRKRKDKLMDNRLELQKKKTG   [152]
CjMADS1      VRERKTEVLKYERRKTESKVI   [153]
ABS          VRERKNELMQQQLENLSRKRR   [156]
DEFH21       VRARKLELLHEQMENLKRTEK   [162]
FBP24        IRARKLELMQQQMENLKKTEF   [156]
AqaBS1       VRARKNQLLQQQLDNLRRKEQ   [131]
DrwBS        VRGRKNQLLHQQMENLSRKGN   [130]
AeAP32       VRSRKEQLLQQQLDNLRRKEH   [130]
ZMM17        VRARKHQLLNQQLDNLRRKEQ   [154]
GGM13        VRSRKNQLMLQQLENLRRKER   [155]
ANR1         VRLKKDQLMTNEIRELNRKGQ   [158]
DEFH125      VRMKKVQMLTDEVHELRRKGH   [157]
MSU91964     VRMKKEQLFMDEIQELNRKGD   [155]
F20D10.60    IRMRKEQLLTQEIQELSQKRN   [157]
AGL17        IRMKREQILTNEIKELTRKRN   [150]
F28O9.80     VRMKKDQMLIEEIQVLNREGN   [156]
BnAGL15      VRERKELLLTKQLEESRLKEQ   [158]
AGL15        VRERKERLLTNQLEESRLKEQ   [151]
;
END;


BEGIN CODONS;
	CODESET  * UNTITLED = Universal: all ;
END;


BEGIN ASSUMPTIONS;
	OPTIONS  DEFTYPE=unord PolyTcount=MINSTEPS ;
END;


BEGIN TREES; 

	TRANSLATE
		1	MdAP31,
		2	MdAP32,
		3	MdAP33,
		4	DeAP3,
		5	ScAP3,
		6	CsAP3,
		7	PhAP3,
		8	HtcAP32,
		9	ThsAP3,
		10	SrhAP3,
		11	AeAP31,
		12	AreAP3,
		13	AmtAP3,
		14	LtAP3,
		15	MpMADS7,
		16	MfAP3,
		17	DrwAP32,
		18	DrwAP33,
		19	DrwAP34,
		20	DrwAP31,
		21	CfAP31,
		22	CfAP32,
		23	LneAP31,
		24	LneAP32,
		25	SmAP3,
		26	HhMADS1,
		27	TcAP3,
		28	IhAP31,
		29	IhAP32,
		30	IhAP33,
		31	NymAP3,
		32	NymPI,
		33	MdPI,
		34	DePI,
		35	ScPI,
		36	AmtPI,
		37	TtsPI,
		38	TtsPI2,
		39	ArePI,
		40	SrhPI,
		41	AspPI,
		42	AePI,
		43	LnePI1,
		44	LnePI2,
		45	IhPI2,
		46	IhPI1,
		47	DrwPI2,
		48	DrwPI1,
		49	MfPI,
		50	LtPI,
		51	MpMADS8,
		52	CfPI1,
		53	CfPI2,
		54	CsPI,
		55	PmPI1,
		56	PhPI,
		57	PmPI2,
		58	TcPI,
		59	HtcPI1,
		60	HtcPI2,
		61	SmPI,
		62	HPI1,
		63	PrDGL,
		64	GGM2,
		65	GGM15,
		66	DAL13,
		67	DAL12,
		68	DAL11,
		69	CjMADS1,
		70	ABS,
		71	DEFH21,
		72	FBP24,
		73	AqaBS1,
		74	DrwBS,
		75	AeAP32,
		76	ZMM17,
		77	GGM13,
		78	ANR1,
		79	DEFH125,
		80	MSU91964,
		81	F20D10.60,
		82	AGL17,
		83	F28O9.80,
		84	BnAGL15,
		85	AGL15
	;
	TREE  * UNTITLED =  [&R] (((((((((((1,3),2),(4,5)),(((((6,(25,(26,27))),28),21),(22,(23,24))),(((10,11),13,14,(15,16)),(17,(18,(19,20)))))),9),12),(7,8),(29,30)),31),(32,(((33,(34,35)),36,(((37,39),(41,42)),40),38,(43,52),(44,53),(47,48),(49,51),50,(54,((((((55,56),(59,60)),57),61),62),58))),(45,46)))),(63,66),(64,(65,67),68),69,((((70,(71,72)),73),((74,76),75)),77)),((((78,79),80,(81,82)),83),(84,85)));

END;


BEGIN MacClade;
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	TreeWindow 0000;
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